Contributed by:
The highlights are:
1. Organic chemistry and biochemistry
2. Alkanes
3. Alkenes and alkynes
4. Aromatic hydrocarbons
5. Hydrocarbon derivatives
6. Polymers
7. Natural Polymers
1.
Chapter 22
Organic and
Biological Molecules
2.
AP Chemistry
LO 2.15 The student is able to explain observations regarding the solubility of
ionic solids and molecules in water and other solvents on the basis of particle
views that include intermolecular interactions and entropic effects.
(Sec 22.5-22.6)
LO 5.11 The student is able to identify the noncovalent interactions within and
between large molecules, and/or connect the shape and function of the large
molecule to the presence and magnitude of these interactions. (Sec 22.6)
3.
Chapter 22
Organic Chemistry and Biochemistry
Organic Chemistry
The study of carbon-containing compounds and their
properties. The vast majority of organic compounds
contain chains or rings of carbon atoms.
Biochemistry
The study of the chemistry of living things.
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4.
Section 22.1
Alkanes: Saturated Hydrocarbons
Compounds composed of carbon and hydrogen.
Saturated: C—C bonds are all single bonds.
alkanes [CnH2n+2]
H H
H C C H
H H
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5.
Section 22.1
Alkanes: Saturated Hydrocarbons
Unsaturated: contains carbon–carbon multiple
bonds.
H H H H
H C C C H C C C H
H H H
6.
Section 22.1
Alkanes: Saturated Hydrocarbons
Isomerism in Alkanes
Structural isomerism – occurs when two molecules
have the same atoms but different bonds.
Butane and all succeeding members of the
alkanes exhibit structural isomerism.
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7.
Section 22.1
Alkanes: Saturated Hydrocarbons
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8.
Section 22.1
Alkanes: Saturated Hydrocarbons
Rules for Naming Alkanes
1. For alkanes beyond butane, add –ane to the Greek
root for the number of carbons.
CH3–CH2–CH2–CH2–CH2–CH3 = hexane
2. Alkyl substituents: drop the –ane and add –yl.
C2H6 is ethane
C2H5 is ethyl
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9.
Section 22.1
Alkanes: Saturated Hydrocarbons
Rules for Naming Alkanes
3. Positions of substituent groups are specified by
numbering the longest chain sequentially. The
numbering is such that substituents are at lowest
possible number along chain.
CH3
CH3–CH2–CH–CH2–CH2–CH3
1 2 3 4 5 6
3-methylhexane
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10.
Section 22.1
Alkanes: Saturated Hydrocarbons
Rules for Naming Alkanes
4. Location and name are followed by root alkane
name. Substituents in alphabetical order and use
di–, tri–, etc.
CH3 CH3
CH3–CH2–CH–CH–CH2–CH3
1 2 3 4 5 6
3,4-dimethylhexane
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11.
Section 22.1
Alkanes: Saturated Hydrocarbons
First Ten Normal Alkanes
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12.
Section 22.1
Alkanes: Saturated Hydrocarbons
The Most Common Alkyl
Substituents and Their
13.
Section 22.1
Alkanes: Saturated Hydrocarbons
EXERCISE!
Name each of the following:
CH3 CH3
a)
H3C C CH2 CH CH2 CH3
CH3 CH3
2,2,4,5-tetramethylhexane
CH2 CH3 CH2 CH3
b)
H3C C CH2 CH2 CH CH2 CH3
CH2 CH3
3,6-diethyl-3-methyloctane
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14.
Section 22.1
Alkanes: Saturated Hydrocarbons
Combustion Reactions of Alkanes
At a high temperature, alkanes react vigorously and
exothermically with oxygen.
Basis for use as fuels.
2C4H10 (g ) + 13O2 (g ) 8CO2 (g ) + 10H2O(g )
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15.
Section 22.1
Alkanes: Saturated Hydrocarbons
Substitution Reactions of Alkanes
Primarily where halogen atoms replace hydrogen
atoms.
hv
CH4 + Cl2 CH3Cl + HCl
hv
CH3Cl + Cl2 CH2Cl2 + HCl
hv
CH2Cl2 + Cl2 CHCl3 + HCl
hv
CHCl3 + Cl2 CCl4 + HCl
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16.
Section 22.1
Alkanes: Saturated Hydrocarbons
Dehydrogenation Reactions of Alkanes
Hydrogen atoms are removed and the product is an
unsaturated hydrocarbon.
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17.
Section 22.1
Alkanes: Saturated Hydrocarbons
Cyclic Alkanes
Carbon atoms can form rings containing only C—C
single bonds.
General formula: CnH2n
C3H6 C4H8 C6H12
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18.
Section 22.1
Alkanes: Saturated Hydrocarbons
The Chair and Boat Forms of Cyclohexane
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19.
Section 22.2
Alkenes and Alkynes
Alkenes: hydrocarbons that contain at least one carbon–
carbon double bond. [CnH2n]
CH3–CH=CH2 propene
Alkynes: hydrocarbons containing at least one carbon–
carbon triple bond. [CnHn]
CH3–CH2–CΞC–CH3 2–pentyne
20.
Section 22.2
Alkenes and Alkynes
Rules for Naming Alkenes
1. Root hydrocarbon name ends in –ene.
C2H4 is ethene
2. With more than 3 carbons, double bond is indicated by
the lowest–numbered carbon atom in the bond.
CH2=CH–CH2–CH3
1 2 3 4
1–butene
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21.
Section 22.2
Alkenes and Alkynes
Rules for Naming Alkynes
Same as for alkenes except use –yne as suffix.
CH3–CH2–CΞC–CH2–CH2–CH2–CH3
3–octyne
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22.
Section 22.2
Alkenes and Alkynes
EXERCISE!
Name each of the following:
CH3 CH3
a) H3C CH CH2 C C CH3
CH3
2,3,5-trimethyl-2-hexene
b) CH2 CH3 CH2 CH3
H3C C CH CH2 CH CH2 CH3
6-ethyl-3-methyl-3-octene
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23.
Section 22.2
Alkenes and Alkynes
Addition Reactions
Pi Bonds (which are weaker than the C—C bonds),
are broken, and new bonds are formed to the
atoms being added.
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24.
Section 22.2
Alkenes and Alkynes
Halogenation Reactions
Addition of halogen atoms of alkenes and alkynes.
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25.
Section 22.3
Aromatic Hydrocarbons
A special class of cyclic unsaturated hydrocarbons.
Simplest of these is benzene (C6H6).
The delocalization of the electrons makes the benzene
ring behave differently from a typical unsaturated
hydrocarbon.
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26.
Section 22.3
Aromatic Hydrocarbons
Benzene (Aromatic Hydrocarbon)
27.
Section 22.3
Aromatic Hydrocarbons
Unsaturated hydrocarbons generally undergo rapid
addition reactions, but benzene does not.
Benzene undergoes substitution reactions in which
hydrogen atoms are replaced by other atoms.
Benzene
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28.
Section 22.3
Aromatic Hydrocarbons
More Complex Aromatic Systems
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29.
Section 22.4
Hydrocarbon Derivatives
AP Learning Objectives, Margin Notes and References
AP Margin Notes
Acids and bases can serve as catalysts in chemical reactions. See Appendix 7.9 “Acid Catalysis” to learn more about
this acid-catalyzed reaction mechanism.
30.
Section 22.4
Hydrocarbon Derivatives
Molecules that are fundamentally hydrocarbons but
have additional atoms or groups of atoms called
functional groups.
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31.
Section 22.4
Hydrocarbon Derivatives
The Common
Functional Groups
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32.
Section 22.5
AP Learning Objectives, Margin Notes and References
Learning Objectives
LO 2.15 The student is able to explain observations regarding the solubility of ionic solids and molecules in water
and other solvents on the basis of particle views that include intermolecular interactions and entropic effects.
33.
Section 22.5
Large, usually chainlike molecules that are built from
small molecules called monomers.
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34.
Section 22.5
Common
Synthetic
Polymers and
their Monomers
and Applications
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35.
Section 22.5
Types of Polymerization
Addition Polymerization
Monomers “add
together” to form the
polymer, with no other
products. (Teflon®)
36.
Section 22.5
Types of Polymerization
Condensation Polymerization
A small molecule, such as water, is formed for each
extension of the polymer chain. (Nylon)
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37.
Section 22.6
Natural Polymers
AP Learning Objectives, Margin Notes and References
Learning Objectives
LO 2.15 The student is able to explain observations regarding the solubility of ionic solids and molecules in water
and other solvents on the basis of particle views that include intermolecular interactions and entropic effects.
LO 5.11 The student is able to identify the noncovalent interactions within and between large molecules, and/or
connect the shape and function of the large molecule to the presence and magnitude of these interactions.
38.
Section 22.6
Natural Polymers
Proteins
Natural polymers made up of -amino acids with molar
masses:
~ 6000 to > 1,000,000 g/mol
Fibrous Proteins: provide structural integrity and
strength to muscle, hair and cartilage.
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39.
Section 22.6
Natural Polymers
Proteins
Globular Proteins:
Roughly spherical shape
Transport and store oxygen and nutrients
Act as catalysts
Fight invasion by foreign objects
Participate in the body’s regulatory system
Transport electrons in metabolism
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40.
Section 22.6
Natural Polymers
α-Amino Acids
–NH2 always attached to the α-carbon
(the carbon attached to –COOH)
H
C = α-carbon
R = side chains H2N C COOH
R
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41.
Section 22.6
Natural Polymers
Bonding in α-Amino Acids
There are 20 amino acids commonly found in proteins.
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42.
Section 22.6
Natural Polymers
Levels of Structure in Proteins
Primary: Sequence of amino acids in the protein chain.
Secondary: The arrangement of the protein chain in the
long molecule (hydrogen bonding determines this).
Tertiary: The overall shape of the protein (determined
by hydrogen-bonding, dipole-dipole interactions, ionic
bonds, covalent bonds and London forces).
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43.
Section 22.6
Natural Polymers
Hydrogen Bonding in α-
Helical Arrangement of a
Protein Chain
44.
Section 22.6
Natural Polymers
Pleated Sheet
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45.
Section 22.6
Natural Polymers
Carbohydrates
Food source for most organisms and structural material
for plants.
Empirical formula = CH2O
Monosaccharides (simple sugars)
pentoses – ribose, arabinose
hexoses – fructose, glucose
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46.
Section 22.6
Natural Polymers
Some Important
Monosaccharides
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47.
Section 22.6
Natural Polymers
Carbohydrates
Disaccharides (formed from 2 monosaccharides joined
by a glycoside linkage, a C—O—C bond between the
rings):
sucrose (glucose + fructose)
Polysaccharides (many monosaccharide units):
starch, cellulose
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48.
Section 22.6
Natural Polymers
The Disaccharide Sucrose is Formed From α-D-glucose and
Fructose
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49.
Section 22.6
Natural Polymers
Nucleic Acids
DNA (deoxyribonucleic acid): stores and transmits
genetic information, responsible (with RNA) for protein
synthesis.
(Molar masses = several billion)
RNA (ribonucleic acid): helps in protein synthesis.
(Molar masses from 20,000 to 40,000 g/mol)
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50.
Section 22.6
Natural Polymers
Nucleotides
Monomers of the nucleic acids.
Three distinct parts:
A five–carbon sugar, deoxyribose in DNA and ribose
in RNA.
A nitrogen–containing organic base.
A phosphoric acid molecule (H3PO4).
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51.
Section 22.6
Natural Polymers
Deoxyribose (in DNA)
and Ribose (in RNA)
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52.
Section 22.6
Natural Polymers
The Organic Bases Found in DNA and RNA
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53.
Section 22.6
Natural Polymers
DNA
Key to DNA’s functioning is its double-helical structure
with complementary bases on the two strands.
The bases form hydrogen bonds to each other.
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54.
Section 22.6
Natural Polymers
Hydrogen Bonding in DNA
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